Monday, 18 December 2017

Nanotechnology: Characterization of Nanomaterials using Single-Particle ICP-MS



The measurement and characterization of nanoparticles is critical to all aspects of nanotechnology. The widespread application of nanomaterials has inevitably led to their release into the environment, which raises concern about their potential adverse effects on the ecosystems and their impact on health. Complete characterization of nanomaterials is important for interpreting the results of toxicological and human health studies.  Many analytical techniques are available for nanometrology, only some of which can be successfully applied to environmental health studies.  One technique that is proving invaluable for detecting and sizing metallic nanoparticles is SP-ICP-MS. Its combination of elemental specificity, sizing resolution and unmated sensitivity makes it extremely applicable for the characterization of nanoparticles which have been integrated into larger products such as foods, consumer goods, personal care products, and pharmaceuticals.

Saturday, 25 March 2017

Inductively Coupled Plasma-Mass Spectrometry : A Rapid Technique for Multi-Elements Determination at the Ultra-Trace Level



Inductively coupled plasma mass spectrometry (ICP-MS) is a type of mass spectrometry which is capable of detecting metals and several non-metals at concentrations as low as one part per trillion. ICP-MS is undoubtedly the fastest growing trace element technique available today. It allows determination of elements with atomic mass ranges 7 to 250. It is able to detect the elements upto part per trillion levels and this ability to carry out rapid multi-elements  determination at the ultra-trace level  have made it very popular in diverse range of applications areas  including environment, geochemical, semiconductor, metallurgical, nuclear, chemical, climatic and biotechnology. In recent years, industrial and biological monitoring has presented major need for metal analysis by ICP-MS. Other uses is in the medical and forensic field, specifically, toxicology and heavy metal poisoning.
For basics of ICP-MS working, please click at the following link…..


Arsenic Speciation Analysis using High Performance Liquid Chromatography-Inductively Coupled Plasma-Mass Spectrometry

Arsenic has different toxicological properties dependent upon both its oxidation state for inorganic compounds as well as the different toxicity levels exhibited for organic arsenic compounds. The field of arsenic speciation analysis has grown rapidly in recent years, especially with the utilization of high-performance liquid chromatography (HPLC) coupled to Inductively Coupled Plasma-Mass Spectrometry (ICP-MS), a highly sensitive and robust detector system.  Complete characterization of arsenic compounds is necessary to understand intake, accumulation, transport, storage, detoxification and activation of this element in the natural environment and living systems. The trivalent and pentavalent forms are the most common oxidation states. From both the biological and the toxicological points of view, arsenic compounds can be classified into three major groups such as inorganic arsenic compounds, organic arsenic compounds and arsenic gas. The most common trivalent inorganic arsenic compounds are arsenic trioxide, sodium arsenite and arsenic trichloride. Pentavalent inorganic compounds include arsenic peroxide, arsenic acid and arsenates such as lead arsenate and calcium arsenate. Common organic arsenic compounds are arsanilic acid, methylarsonic acid, dimethylarsinic acid (cacodylic acid) and arsenobetaine. Arsenic trioxide is only slightly soluble in water, in sodium hydroxide it forms arsenite and with concentrated hydrochloric acid it forms arsenic trichloride. Sodium arsenite and sodium arsenate are highly soluble in water. Interchange of valence state may occur in aqueous solutions depending on the pH and on the presence of other substances which can be reduced or oxidized. Arsenic is mainly transported in the environment by water. In oxygenated water arsenic usually occurs as arsenate but under reducing conditions e.g. in deep well-water, arsenates predominates. In water the methylation of inorganic arsenic to methyl and dimethyl arsenic acids is associated with biological activity. In oxygenated soil inorganic arsenic is present in the pentavalent form. Under reducing conditions, it is in the trivalent form.
 Speciation Analysis is the analytical activity of identifying and/or measuring in a sample the quantity of one or more individual chemical species. Speciation is a growing field of analysis that is indispensable for accurately understanding the true nature of trace elements in the environment, industrial processes and biochemical pathways. Toxicity issues are the main driving force behind legislation and speciation analysis. Over the last two decade elemental speciation has become an established field of analysis as the scientific community recognizes that total element concentrations cannot provide the information necessary to draw valid conditions in a number of domains. The need to define and measure chemical species of an element lies in the fact that physiological factors such as toxicity, bioavailability, mobility and reactivity are dependent on the specific form of an element. Chemical species can be free ions, inorganic complexes, organometallic compounds, biomolecules and structures of high molecular mass.
Speciation analysis is performed in three distinct stages, namely sample preparation, separation of the chemical species and detection. Due to the wide range of sample matrices and chemical species a number of different methodologies for sample preparation and species separation have been developed. Speciation analysis demands a soft extraction technique in comparison to digestion methods used for total elemental analysis. Aqueous, enzymatic or solvent extraction is employed with the aid of agitation and heat. Ultrasonication, microwave extraction or accelerated solvent extraction are some popular techniques.
HPLC is the technique of choice in modern speciation analyses due to their resolution and the ease with which they are coupled to ICP-MS, allowing for on-line separation and detection. ICP-MS is often favoured as element-specific chromatographic detector due to its multi-element and multi-isotopic detection capability. For this, compatible HPLC mobile phase flow rates allow for a coupling connection from the outlet from the HPLC column directly to the ICP-MS nebulizer and chemical species are separate in accordance with their affinity to a mobile and stationary phase component. ICP-MS instruments with quadrupole analyser are the most popular for speciation analysis due to their robust nature, small footprint, low cost and their adaptability to changing configurations. ICP-MS with collision cell technology is typically operated using kinetic energy discrimination (KED) approach using an inert collision gas such as helium but reactive gases such as hydrogen or ammonia may also be used to attenuate specific polyatomic interferences. Commercially available speciation software and kits provide fully automated analysis and flexible chromatographic peaks integration features for a user-friendly analytical solution.
       Speciation analysis has been perceived a highly sophisticated analytical tool due to the complexity of the samples but advances in sample preparation, separation science and analytical instrumentation have now greatly improved the robustness, accuracy and sample throughput capabilities for speciation analyses. The high specificity and sensitivity of the HPLC-ICP-MS technique provides scientists in the environmental and occupational exposures with a comprehensive information sources to monitor and maintain process control and to ensure compliance with key legislation.

Wednesday, 22 February 2017

New Plant Breeding Techniques to produce New Improved Crops



Many new plant
breeding techniques such as cisgenesis, intragensis and genome editing are
currently applied as potential alternative to transgenesis to generate
engineered crops with various new traits. Crops produced using some these
techniques cannot be distinguished from their conventionally bred counterpart
and therefore there are claims that they should be exempted from the GMO
legislation.






New Plant Breeding Techniques to produce New Improved Crops: An Example Description

Arsenic Poisoning and Human Health

Arsenic Poisoning – Effects on Human Health

Abstract: 

Arsenic has different toxicological properties dependent upon both its oxidation state for inorganic compounds as well as the different toxicity levels exhibited for organic arsenic compounds. Some currently used chromatographic and mass spectrometry applications as well as sample handling procedure necessary to detect and quantify arsenic in its various chemical forms.This article describes the essential background and toxicity of arsenic in the environment. 

Introduction

Arsenic and its compounds are ubiquitous in nature and exhibit both metallic and non metallic properties. It is known that arsenic has different toxicological properties dependent upon both its oxidation state for inorganic compounds as well as the different toxicity levels exhibited for organic arsenic compounds. Arsenic appears in nature primarily in the form of sulfides in association with ores of silver, lead, copper, nickel, antimony, cobalt and iron. Trace amount of arsenic are found in soils and other environmental media.  Arsenic is released to the atmosphere from both natural and anthropogenic sources. The principal source is volcanic activity. Man-made emissions to air arise from the smelting of metals, the contribution of fuels and use of pesticides. World production of arsenic kept rising mid-1940s. As arsenic pesticides, especially insecticides, were gradually replaced by the other preparations, the production of arsenic declined. Arsenic is still used in production of agricultural chemicals. Arsenic is an active component of antifungal wood preservatives. It is also used in the pharmaceutical and glass industries and in the manufacture of poisonous baits.  Arsenicals are used in the manufacture of pigments while metallic arsenic is used in the manufacture of alloys. Gallium arsenide and indium arsenide are used in the production of certain semiconductor devices. This article describes toxicity and some currently used chromatographic mass spectrometry applications to detect and quantify arsenic in its various chemical forms.

Forms of Arsenic

The trivalent and pentavalent forms are the most common oxidation states. From both the biological and the toxicological points of view, arsenic compounds can be classified into three major groups
·        Inorganic arsenic compounds
·        Organic arsenic compounds
·        Arsenic gas
The most common trivalent inorganic arsenic compounds are arsenic trioxide, sodium arsenite and arsenic trichloride. Pentavalent inorganic compounds include arsenic peroxide, arsenic acid and arsenates such as lead arsenate and calcium arsenate. Common organic arsenic compounds are arsanilic acid, methylarsonic acid, dimethylarsinic acid (cacodylic acid) and arsenobetaine. Arsenic trioxide is only slightly soluble in water, in sodium hydroxide it forms arsenite and with concentrated hydrochloric acid it forms arsenic trichloride. Sodium arsenite and sodium arsenate are highly soluble in water. Interchange of valence state may occur in aqueous solutions depending on the pH and on the presence of other substances which can be reduced or oxidized. Arsenic is mainly transported in the environment by water. In oxygenated water arsenic usually occurs as arsenate but under reducing conditions e.g. in deep well-water, arsenates predominates. In water the methylation of inorganic arsenic to methyl and dimethyl arsenic acids (DMA) is associated with biological activity. In oxygenated soil inorganic arsenic is present in the pentavalent form. Under reducing conditions it is in the trivalent form.

Toxicokinetics

The major routes of arsenic absorption in the general population are ingestion and inhalation. Human and animal data indicate that over 90 % of the ingested dose of dissolved inorganic trivalent or pentvalent arsenic is absorbed from the gastrointestinal tract. Organic arsenic compound in sea food are also readily absorbed. Factors affecting the extent of absorption from the lungs includes the chemical form , particles size ad solubility. Air borne arsenic is usually in the forms of arsenic trioxide.  Particles of more than 10 micrometer in aerodynamic diameter are predominantly deposited in the upper airways (nasopharynx), particles of between 5 and 10 micrometer are deposited in the airways cleaned by mucociliary action and particles with diameter of less than 2 micrometer penetrate significantly into the alveoli. The overall absorption as a proportion of the inhaled dose was about 30-35 % while the amount of arsenic excluded in urine was about 40-60 % of the estimated inhaled dose.
Blood is the main vehicle for the transport of arsenic following absorption and arsenic is cleared relatively rapidly from it. In humans, skin, excretory and storage organs such as nails and hair, have the highest concentration. Arsenic in the kidneys, liver, bile, brain, skeleton, skin and blood are 2-2.5 times higher for the trivalent than for the pentavalent form, and are greatly increased at higher doses.
Trivalent inorganic arsenic is oxidized in vivo in animals and human exposed to arsenite. The reduction of arsenate to arsenite, has been demonstrated in mice and rabbits. Both arsenite and arsenate are methylated in the liver. Both methylated species MMA and DMA are considered to be less toxic and to bind to tissues and are eliminated more rapidly than the unmethylated form. On average, 20-25% of inorganic arsenic remains unmethylated.

Effects on Human Health

As a consequence of the many different uses of arsenic and arsenicals, there is wide spectrum of situation in which human may be exposed to the element. Arsenic in air is present mainly in particulate forms as inorganic arsenic. Particulate arsenic compounds may be inhaled, deposited in the respiratory tract and absorbed into the blood. Inhalation of arsenic from ambient air is usually a minor exposure route for the general population. Tobacco smoke may contain arsenic especially when the tobacco plants have been treated with lead arsenate insecticide. The use of arsenic pesticides is now prohibited in most countries. Occupation exposure to arsenic occurs primarily among workers in the copper smelting industry, at power plant burning arsenic-rich coal and using or producing pesticides containing arsenic. Inhalation exposure to arsenic can also take place during production of gallium arsenide in the microelectronics industry and metals ore mining.

Drinking water may contribute significantly to oral intake in regions where there are high arsenic concentrations in well-water or river-water or mine drainage areas. The concentration in ground water depends on the arsenic content of the bed-rock.  With the exception of some kind of sea food, most foods contain low levels of arsenic, normally less than 0.25 mg/kg. Marine organisms may contain large amount of organo-arsenicals (arsenobetaine). These arsenic derivatives are not acutely toxic because of their low biological reactivity and their rapid excretion in urine. Hence, the amount of arsenic ingested daily by humans via food is greatly influenced by the amount of sea food in the diet.

Recently,  the research done by the Indian Council of Agricultural Research (ICAR) of India was published showing that 90 % of arsenic-laden water in affected areas (96 districts) was used for irrigation and it was found that some vegetables such as brinjal, potato, radish, cauliflower had high quantity of arsenic. Arsenic contamination is spreading fast and entering the food chain through farm products in the region. As people take contaminated water along with contaminated food, the chances of damage become greater. The report says total number of deaths so far is one lakh people, with over three lakh suffering from arsenic-related disease.
There are three population groups at high exposure risk:
  • ·        People drinking water and food products with abnormally high concentrations of arsenic
  • ·        The occupationally exposed people
  • ·        Children living in close vicinity of smelters

The clinical picture of chronic poisoning with arsenic varies widely. It is usually dominated by changes in the skin and mucous membranes and by neurological, vascular and haematogical lesions. Arsenic and its inorganic compounds have been known to be neurotoxic. The skin is a common critical organ in people exposed to inorganic arsenical compounds. Eczematoid symptoms develop with varying degrees of severity.  Hyperkerotosis, warts and melanosis of the skin are the most commonly observed lesions in chronic exposure. There is sufficient evidence that inorganic arsenic compounds are skin and lung carcinogen in human. There are many arsenic compounds both organic and inorganic in the environment. Inorganic arsenic can have acute, subacute and chronic effects which may be wither local or systemic. Lung cancer is considered to be critical effect following inhalation. A WHO working group on arsenic conducted a quantitative risk assessment for arsenic, assuming a linear relationship between the cumulative arsenic dose and the relation risk of developing lung cancer from inorganic arsenic exposure were based on the study by Pinto et al.

Speciation Analysis

This is the analytical activity of identifying and/or measuring in a sample the quantity of one or more individual chemical species. The need to define and measure chemical species of an element lies in the fact that physiological factors such as toxicity, bioavailability, mobility and reactivity are dependent on the specific form of an element. Chemical species can be free ions, inorganic complexes, organometallic compounds, biomolecules and structures of high molecular mass. The field of arsenic speciation analysis has grown rapidly in recent years, especially with the utilization of high-performance liquid chromatography (HPLC) coupled to ICP-MS, a highly sensitive and robust detector system. Complete characterization of arsenic compounds is necessary to understand intake, accumulation, transport, storage, detoxification and activation of this element in the natural environment and living systems.

Conclusions

As a consequence of the many different uses of arsenic and arsenicals, there is wide spectrum of situation in which human may be exposed to the element. The clinical picture of chronic poisoning with arsenic varies widely. Arsenic has different toxicological properties dependent upon both its oxidation state for inorganic compounds as well as the different toxicity levels exhibited for organic arsenic compounds. The field of arsenic speciation analysis has grown rapidly in recent years, especially with the utilization of high-performance liquid chromatography (HPLC) coupled to ICP-MS. 

References 

1.      Air Quality Guidelines for Europe. Copenhagen, World Health Organization Regional Office
for Europe, 1987 (WHO Regional Publications, European Series, No. 23).
2.      Air Quality Guidelines, Second Edition chapter 6.1, Arsenic, WHO Regional Office for Europe, Copenhagen, Denmark, 2000.
3.      Arsenic, Geneva, World Health Organization, Environmental health Critics, No.18 (1981).
4.      Diaz-Barriaga F et al. (1993) Arsenic and cadmium exposure in children near a smelter complex in San Luis Postosi, Mexico, Environmental Research, 62:242-250
5.      European Virtual Institute of Speciation Analysis, www.speciation.net
6.      Hindustan Times, http://www.hindustantimes.com/india/arsenic-contamination-on-the-rise
7.      Ishinishi, N et al. (1986) Arsenic, in: Friberg L., Nordbag GF and Vouk BV, ed. Hand book of the toxicology of metals, Vol. II, Amsterdam – New York-Oxford, Elsevier.
8.      McSheehy, S and Nash, M; (2006) Elemental Speciation Analysis using ICP-MS;
9.      Offergelt JA et al. (1992) Relation between airborne arsenic trioxide and urinary excretion of inorganic arsenic and its methylated metabolites, British Journal of Industrial medicine.
10.   Pinto, SS et al. (1977). Mortality experience in relation to measured arsenic trioxide. Environmental health perspectives, 19:127-130.
11.   United States Environmental Protection Agency, www.epa.gov/






Wednesday, 1 February 2017

Opening Black Box of Soil Microbial Diversity through Molecular Techniques

Image result for opening the black box of soil microbial diversity

http://www.biotecharticles.com/Biotech-Research-Article/Opening-Black-Box-of-Soil-Microbial-Diversity-through-Molecular-Techniques-3777.html

The vast majority of microbes have not yet been isolated, identified or characterized. The advent of culture-independent techniques has transformed the field of microbiology and soil microbial ecology in particular. PCR-based techniques such as DGGE, TGGE, T-RFLP, allow the classification of microorganisms based on particular genetic markers such as 16S rRNA and the profiling of complex microbial communities on the basis of sequence diversity.